casacore
|
Mmeory storage manager for variable shaped table arrays. More...
#include <MSMIndColumn.h>
Classes | |
class | Data |
Public Member Functions | |
MSMIndColumn (MSMBase *, int dataType) | |
Create a column of the given type. More... | |
~MSMIndColumn () | |
Frees up the storage. More... | |
void | setShapeColumn (const IPosition &shape) |
Set the (fixed) shape of the arrays in the entire column. More... | |
const IPosition & | columnShape () const |
Get the column shape. More... | |
void | setShape (rownr_t rownr, const IPosition &shape) |
Set the shape of the array in the given row and allocate the array in the file. More... | |
Bool | isShapeDefined (rownr_t rownr) |
Is the shape defined (i.e. More... | |
uInt | ndim (rownr_t rownr) |
Get the dimensionality of the item in the given row. More... | |
IPosition | shape (rownr_t rownr) |
Get the shape of the array in the given row. More... | |
Bool | canChangeShape () const |
This storage manager can handle changing array shapes. More... | |
void | getArrayV (rownr_t rownr, ArrayBase &arr) |
Get an array value in the given row. More... | |
void | putArrayV (rownr_t rownr, const ArrayBase &arr) |
Put an array value into the given row. More... | |
void | getSliceV (rownr_t rownr, const Slicer &, ArrayBase &arr) |
Get a section of the array in the given row. More... | |
void | putSliceV (rownr_t rownr, const Slicer &, const ArrayBase &arr) |
Put into a section of the array in the given row. More... | |
void | remove (rownr_t rownr) |
Remove the value in the given row. More... | |
Public Member Functions inherited from casacore::MSMColumn | |
MSMColumn (MSMBase *smptr, int dataType, Bool byPtr) | |
Create a column of the given type. More... | |
virtual | ~MSMColumn () |
Frees up the storage. More... | |
virtual void | getBool (rownr_t rownr, Bool *dataPtr) |
Get a scalar value in the given row. More... | |
virtual void | getuChar (rownr_t rownr, uChar *dataPtr) |
virtual void | getShort (rownr_t rownr, Short *dataPtr) |
virtual void | getuShort (rownr_t rownr, uShort *dataPtr) |
virtual void | getInt (rownr_t rownr, Int *dataPtr) |
virtual void | getuInt (rownr_t rownr, uInt *dataPtr) |
virtual void | getInt64 (rownr_t rownr, Int64 *dataPtr) |
virtual void | getfloat (rownr_t rownr, float *dataPtr) |
virtual void | getdouble (rownr_t rownr, double *dataPtr) |
virtual void | getComplex (rownr_t rownr, Complex *dataPtr) |
virtual void | getDComplex (rownr_t rownr, DComplex *dataPtr) |
virtual void | getString (rownr_t rownr, String *dataPtr) |
virtual void | putBool (rownr_t rownr, const Bool *dataPtr) |
Put a scalar value into the given row. More... | |
virtual void | putuChar (rownr_t rownr, const uChar *dataPtr) |
virtual void | putShort (rownr_t rownr, const Short *dataPtr) |
virtual void | putuShort (rownr_t rownr, const uShort *dataPtr) |
virtual void | putInt (rownr_t rownr, const Int *dataPtr) |
virtual void | putuInt (rownr_t rownr, const uInt *dataPtr) |
virtual void | putInt64 (rownr_t rownr, const Int64 *dataPtr) |
virtual void | putfloat (rownr_t rownr, const float *dataPtr) |
virtual void | putdouble (rownr_t rownr, const double *dataPtr) |
virtual void | putComplex (rownr_t rownr, const Complex *dataPtr) |
virtual void | putDComplex (rownr_t rownr, const DComplex *dataPtr) |
virtual void | putString (rownr_t rownr, const String *dataPtr) |
virtual void | getScalarColumnV (ArrayBase &data) |
Get all scalar values in the column. More... | |
virtual void | putScalarColumnV (const ArrayBase &data) |
Put all scalar values in the column. More... | |
virtual void | addRow (rownr_t newNrrow, rownr_t oldNrrow) |
Add (newNrrow-oldNrrow) rows to the column. More... | |
void | resize (rownr_t nrval) |
Resize the data blocks. More... | |
virtual void | doCreate (rownr_t nrrow) |
Create the number of rows in a new table. More... | |
virtual void | putFile (rownr_t nrval, AipsIO &) |
Make it possible to write the column data. More... | |
virtual void | getFile (rownr_t nrval, AipsIO &) |
Make it possible to read the column data. More... | |
virtual void | reopenRW () |
Reopen the storage manager files for read/write. More... | |
virtual Bool | ok () const |
Check if the class invariants still hold. More... | |
Public Member Functions inherited from casacore::StManColumnBase | |
StManColumnBase (int dataType) | |
Default constructor. More... | |
~StManColumnBase () | |
virtual int | dataType () const |
Return the data type of the column. More... | |
DataType | dtype () const |
Int | elemSize () const |
Return the size of an element of the column's data type. More... | |
Public Member Functions inherited from casacore::DataManagerColumn | |
DataManagerColumn () | |
Create a column. More... | |
virtual | ~DataManagerColumn () |
Frees up the storage. More... | |
void | setIsFixedShape (Bool isFixedShape) |
Set the isFixedShape flag. More... | |
Bool | isFixedShape () const |
Is this a fixed shape column? More... | |
virtual String | dataTypeId () const |
Get the data type id of the column for dataType==TpOther. More... | |
virtual Bool | isWritable () const |
Test if data can be put into this column. More... | |
virtual void | setMaxLength (uInt maxLength) |
Set the maximum length of the value (can be used for strings). More... | |
void | setFixedShapeColumn (const IPosition &shape) |
Set the shape of all (fixed-shaped) arrays in the column. More... | |
virtual void | setShapeTiled (rownr_t rownr, const IPosition &shape, const IPosition &tileShape) |
Set the shape and tile shape of an (variable-shaped) array in the given row. More... | |
virtual IPosition | tileShape (rownr_t rownr) |
Get the tile shape of the item in the given row. More... | |
ColumnCache & | columnCache () |
Get access to the ColumnCache object. More... | |
const ColumnCache * | columnCachePtr () const |
void | get (rownr_t rownr, Bool *dataPtr) |
Get the scalar value in the given row. More... | |
void | get (rownr_t rownr, uChar *dataPtr) |
void | get (rownr_t rownr, Short *dataPtr) |
void | get (rownr_t rownr, uShort *dataPtr) |
void | get (rownr_t rownr, Int *dataPtr) |
void | get (rownr_t rownr, uInt *dataPtr) |
void | get (rownr_t rownr, Int64 *dataPtr) |
void | get (rownr_t rownr, float *dataPtr) |
void | get (rownr_t rownr, double *dataPtr) |
void | get (rownr_t rownr, Complex *dataPtr) |
void | get (rownr_t rownr, DComplex *dataPtr) |
void | get (rownr_t rownr, String *dataPtr) |
void | get (rownr_t rownr, void *dataPtr) |
This function is the get for all non-standard data types. More... | |
void | put (rownr_t rownr, const Bool *dataPtr) |
Put the scalar value into the given row. More... | |
void | put (rownr_t rownr, const uChar *dataPtr) |
void | put (rownr_t rownr, const Short *dataPtr) |
void | put (rownr_t rownr, const uShort *dataPtr) |
void | put (rownr_t rownr, const Int *dataPtr) |
void | put (rownr_t rownr, const uInt *dataPtr) |
void | put (rownr_t rownr, const Int64 *dataPtr) |
void | put (rownr_t rownr, const float *dataPtr) |
void | put (rownr_t rownr, const double *dataPtr) |
void | put (rownr_t rownr, const Complex *dataPtr) |
void | put (rownr_t rownr, const DComplex *dataPtr) |
void | put (rownr_t rownr, const String *dataPtr) |
void | put (rownr_t rownr, const void *dataPtr) |
This function is the put for all non-standard data types. More... | |
virtual void | getScalarColumnCellsV (const RefRows &rownrs, ArrayBase &dataPtr) |
Get some scalar values in the column. More... | |
virtual void | putScalarColumnCellsV (const RefRows &rownrs, const ArrayBase &dataPtr) |
Put some scalar values in the column. More... | |
virtual void | getArrayColumnV (ArrayBase &data) |
Get all array values in the column. More... | |
virtual void | putArrayColumnV (const ArrayBase &data) |
Put all array values in the column. More... | |
virtual void | getArrayColumnCellsV (const RefRows &rownrs, ArrayBase &data) |
Get some array values in the column. More... | |
virtual void | putArrayColumnCellsV (const RefRows &rownrs, const ArrayBase &data) |
Put some array values in the column. More... | |
virtual void | getColumnSliceV (const Slicer &slicer, ArrayBase &data) |
Get a section of all arrays in the column. More... | |
virtual void | putColumnSliceV (const Slicer &slicer, const ArrayBase &data) |
Put into a section of all arrays in the column. More... | |
virtual void | getColumnSliceCellsV (const RefRows &rownrs, const Slicer &slicer, ArrayBase &data) |
Get a section of some arrays in the column. More... | |
virtual void | putColumnSliceCellsV (const RefRows &rownrs, const Slicer &slicer, const ArrayBase &data) |
Put into a section of some arrays in the column. More... | |
void | throwGet () const |
Throw an "invalid operation" exception for the default implementation of get. More... | |
void | throwPut () const |
Throw an "invalid operation" exception for the default implementation of put. More... | |
void | setColumnName (const String &colName) |
Set the column name. More... | |
const String & | columnName () const |
Get rhe column name. More... | |
Private Member Functions | |
void | deleteArray (rownr_t rownr) |
Delete the array in the given row. More... | |
Data * | getShape (rownr_t rownr) |
Read the shape at the given row. More... | |
void * | getDataPtr (rownr_t rownr) |
Get a pointer to the data array. More... | |
MSMIndColumn (const MSMIndColumn &) | |
Forbid copy constructor. More... | |
MSMIndColumn & | operator= (const MSMIndColumn &) |
Forbid assignment. More... | |
Private Attributes | |
IPosition | fixedShape_p |
The shape of all arrays in case it is fixed. More... | |
uInt | elemSize_p |
The size of an array element. More... | |
uInt | startSize_p |
The size at the start of the data (for the IPosition). More... | |
Additional Inherited Members | |
Static Public Member Functions inherited from casacore::StManColumnBase | |
static Bool | isNativeDataType (int dtype) |
Test if the given data type is supported by storage managers. More... | |
Protected Member Functions inherited from casacore::MSMColumn | |
uInt | findExt (rownr_t rownr, Bool setCache) |
Find the extension in which the row number is. More... | |
void * | allocData (rownr_t nrval, Bool byPtr) |
Allocate an extension with the data type of the column. More... | |
void | deleteAll () |
Delete all extensions. More... | |
void | deleteData (void *datap, Bool byPtr) |
Delete an extension. More... | |
void | removeData (void *datap, rownr_t inx, rownr_t nrvalAfter) |
Remove an entry (i.e. More... | |
virtual void | initData (void *datap, rownr_t nrval) |
Initialize the data (after an open). More... | |
void * | getArrayPtr (rownr_t rownr) |
Get the pointer for the given row. More... | |
void | putArrayPtr (rownr_t rownr, void *dataPtr) |
Put the pointer for the given row. More... | |
Protected Member Functions inherited from casacore::DataManagerColumn | |
virtual void | getOther (rownr_t rownr, void *dataPtr) |
This function is the get for all non-standard data types. More... | |
virtual void | putOther (rownr_t rownr, const void *dataPtr) |
This function is the put for all non-standard data types. More... | |
void | getScalarColumnBase (ArrayBase &dataPtr) |
The default implementations of get and put functions. More... | |
void | putScalarColumnBase (const ArrayBase &dataPtr) |
void | getScalarColumnCellsBase (const RefRows &rownrs, ArrayBase &dataPtr) |
void | putScalarColumnCellsBase (const RefRows &rownrs, const ArrayBase &dataPtr) |
void | getArrayColumnBase (ArrayBase &data) |
void | putArrayColumnBase (const ArrayBase &data) |
void | getArrayColumnCellsBase (const RefRows &rownrs, ArrayBase &data) |
void | putArrayColumnCellsBase (const RefRows &rownrs, const ArrayBase &data) |
void | getSliceBase (rownr_t rownr, const Slicer &slicer, ArrayBase &data) |
void | putSliceBase (rownr_t rownr, const Slicer &slicer, const ArrayBase &data) |
void | getColumnSliceBase (const Slicer &slicer, ArrayBase &data) |
void | putColumnSliceBase (const Slicer &slicer, const ArrayBase &data) |
void | getColumnSliceCellsBase (const RefRows &rownrs, const Slicer &slicer, ArrayBase &data) |
void | putColumnSliceCellsBase (const RefRows &rownrs, const Slicer &slicer, const ArrayBase &data) |
Protected Attributes inherited from casacore::MSMColumn | |
MSMBase * | stmanPtr_p |
Bool | byPtr_p |
The data is indirectly accessed via a pointer (for the derived classes). More... | |
rownr_t | nralloc_p |
The number of allocated rows in the column. More... | |
uInt | nrext_p |
The nr of extensions in use. More... | |
Block< void * > | data_p |
The assembly of all extensions (actually Block<T*>). More... | |
Block< rownr_t > | ncum_p |
The cumulative nr of rows in all extensions. More... | |
Mmeory storage manager for variable shaped table arrays.
Internal
StManColumnArrayAipsIO handles indirect arrays in a table column.
An array (or section of an array) is only read when needed. It, however, caches the array shape using the helper class StIndArray. Pointers to these objects are maintained using the standard StManColumnAipsIO facilities. When the column gets written, the offsets in the StManArrayFile file get written. Those will be read back when the column is read in.
When a row gets deleted or when the array gets bigger, the file space is lost. This storage manager is a simple one and no attempts are done to make it smart.
Definition at line 76 of file MSMIndColumn.h.
casacore::MSMIndColumn::MSMIndColumn | ( | MSMBase * | , |
int | dataType | ||
) |
Create a column of the given type.
casacore::MSMIndColumn::~MSMIndColumn | ( | ) |
Frees up the storage.
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private |
Forbid copy constructor.
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virtual |
This storage manager can handle changing array shapes.
Reimplemented from casacore::DataManagerColumn.
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inline |
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private |
Delete the array in the given row.
Get an array value in the given row.
The buffer given by arr
has to have the correct length (which is guaranteed by the ArrayColumn get function).
Reimplemented from casacore::DataManagerColumn.
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inlineprivate |
Get a pointer to the data array.
Definition at line 167 of file MSMIndColumn.h.
References getShape(), and startSize_p.
Get a section of the array in the given row.
The buffer given by arr
has to have the correct length (which is guaranteed by the ArrayColumn getSlice function).
Reimplemented from casacore::DataManagerColumn.
Is the shape defined (i.e.
is there an array) in this row?
Reimplemented from casacore::DataManagerColumn.
Get the dimensionality of the item in the given row.
0 is returned if there is no array.
Reimplemented from casacore::DataManagerColumn.
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private |
Forbid assignment.
Put an array value into the given row.
The buffer given by arr
has to have the correct length (which is guaranteed by the ArrayColumn put function).
Reimplemented from casacore::DataManagerColumn.
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virtual |
Put into a section of the array in the given row.
The buffer given by arr
has to have the correct length (which is guaranteed by the ArrayColumn putSlice function).
Reimplemented from casacore::DataManagerColumn.
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virtual |
Remove the value in the given row.
This will result in lost file space.
Reimplemented from casacore::MSMColumn.
Set the shape of the array in the given row and allocate the array in the file.
Reimplemented from casacore::DataManagerColumn.
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virtual |
Set the (fixed) shape of the arrays in the entire column.
Reimplemented from casacore::DataManagerColumn.
Get the shape of the array in the given row.
An zero-length IPosition is returned if there is no array.
Reimplemented from casacore::DataManagerColumn.
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private |
The size of an array element.
Definition at line 154 of file MSMIndColumn.h.
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private |
The shape of all arrays in case it is fixed.
Definition at line 152 of file MSMIndColumn.h.
Referenced by columnShape().
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private |
The size at the start of the data (for the IPosition).
Definition at line 156 of file MSMIndColumn.h.
Referenced by getDataPtr().